cool... looks like a very similar hull form to the BWseacat?
Hull separation and negative wave interference is only a problem at around 10-12kts for a cat in this size range... at higher speeds (anything above 15kts) negative interference is completely gone unless your hulls are extremely close together (under 2m)... so how much time will you spend cruising around 10-12kts? The extra drag from this interference is quite small anyways, and your very efficient at this modest speed anyway. You would most likely give much more influence in your decisions to the general layout and size you need from this boat.
As for tunnel clearance, i dont really know and it seems to be a bit of a black art... many variables with respect to riding on foamy water cushions, bridgedeck slamming, the pitching inertia of the vessel, how far forward the bridgedeck lowest point is carried etc etc... all very complicated... Alik has posted some good info on this subject in this forum somewhere, but i think most of its content is derived from planning cats - i cant remember now... SO, what most designers do for displacement cats, is to give as much clearance as possible without compromising the aesthetics of the vessel. - As the bridgdeck clearance gets higher, the entire boat gets higher and things can start to look out of proportion with excessive freeboard or tall cabin sides etc... then there is the extra weight / cost to consider when building everything larger/taller than it needs to be... this is why i say its black art, no easy answers on this one. Im using 750mm clearance at max displacement, more likely closer to 800mm when at typical average weight. This allowed the boat to look right to my eye, and its roughly what a few other similar boats are using so i figured it must be in the ballpark... i would have liked closer to 900mm but things started to look out of proportion on my design...