If I understood the requirements corectly this will not be a deep sea fishing vessel, or a high volume one. The OP mentioned beeing able to reach most fishing grounds by kayak and being prevented to reach more interesting spots by a fast running tide. He also said that a tour around the island would be around 18km (10 nautical miles) and that he would like to take 2-4 paying customers. Based on this I would expect a tipical day to be a short run to a fishing spot somewhere around and near the island, fishing for an hour or so by fishing rod or handline while drifting or at anchor, move to the next spot, repeat a few times, make a run home. The worst conditions I would expect are wind against the tide. With good weather predictions like one expects in a first world country like Japan and normal common sense he should be ok. Basicly he wants what in the US would be a typical sportsfisherman.
This usage pattern can be sustained with electric propulsion, but I agree that a generator is cheap insurance. If I got the pattern wrong then all bets are of and it can not be done by electric propulsion alone.
The economic sense of all this is a different thing and I can not begin to asses if it makes sense or not. 40 000USD buys a lot of fuel, even in Japan and even on a tiny island where fuel must be carried by drum. On the other hand if he has a steady supply of eco-friendly or novelty hungry customers and if you add the local subsidizing maybe he can make a net profit and live of it.
I see a 9-10m catmaran with a small cuddy housing the electronics, a toilet and offering some wind protection, a bimini for sunny days, and icebox fishholds in the hulls. Maybe a separate icebox for the clients food/drinks, a grill outside and a meth stove in the galley if he wants to be fancy.
For emergency backup a 15hp 2stroke outboard and two canisters of fuel stored in a locker should always bring him home.
Would I be in his place I would contact Mr. Woods about his Jazz 30 design, buy two Nissan Leaf battery packs from wrecked cars, put an electric motor of the required power on a outboard leg, aquire the needed control and instrumentation from established EV sources and find an electrical engineer to wire the whole mess togheter. Put the big electric outboard on one hull, a gas outboard of similar power and a 2hp electric (either a conversion or something like a Torqueedo) on the other and go fishing. This setup is redundant and allows everything, high speed using either electric or fossil fuel, slow speed under optimized small electric motor, two engined manoevers and double the needed power for dire situations. The only concern would be the weight of the batteries, but with careful calculations of predictable usage, some speed shaving and maybe some solar on the Bimini I bet I could cut the pack to one 24kW Leaf pack.