The laminate is about 1/4" to 5/16" on each side of floors that are about 3" wide.
I am estimating that the floor depth is perhaps about 10", if the overall width is about 3.5" including laminate?
And if the laminate is 6 - 8 mm thick on each side then the fibreglass alone should be a fairly strong top-hat section, if one considers the plywood to be just acting as a former.
Removing the interior furnishings locally, and then cutting the floors out sounds very drastic to me.
If you wallop the sides of the floors, do they flex much, if at all?
The existing laminates appear to be in reasonable condition generally (no reported signs of stress cracks or delamination), and I would be reluctant to start chopping out good structure unnecessarily.
Are the tanks a tight fit in these compartments?
If the tanks are not a tight fit, and there is room to make the floors a wee bit wider, and as you are worried about their strength, I am wondering about the feasibility of adding a core to the front and back of each floor, and then overlaminating this core - this would dramatically increase the stiffness of the sides of the top hat section.