Pinholes are a problem for al boatbuilders. They key is to fill them before sanding or blow them with air and fill.
After your primer coat of paint. Walk around with commercial fairing compound and fill them and then sand.
I usually mark them with a small tape because they are easier to see when casually walking around.
After a aecond coat of primer; same process.
Well what exactly is a primer in this context? I have inquired to all my epoxy suppliers for epoxy primer. No one has even heard of such a thing. They tell me to apply paint directly to epoxy, and it will stick (in my experience it does). What is a primer here, then? Perhaps you mean just a thin layer of paint? The only commercial fairing compounds I can get here are polyester-based. They don't work well when applied on top of epoxy, I heard...
Please correct me if I'm wrong. I don't get what boatbuilders call primer.
P.S. I figured that perhaps by primer you meant specialized paints that are divided into undercoat (primer) and topcoat? The only paints I ever used have no such separation, and are sold in a single can. The only paints with that separation into undercoat and topcoat I ever saw are one of these premium yacht paints that are extremely expensive; I try to stay away from them.